Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX360709: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-213838' containing sample 'Lachnospiraceae bacterium ORNL_6EZ3_SD_35'
4 ILLUMINA (Illumina HiSeq 2000) runs: 12.7M spots, 2.6G bases, 1.6Gb downloads

UUID: c369e664-fa47-4089-a54b-25569e0e5e04

Design: Illumina sequencing of Lachnospiraceae bacterium ORNL_6EZ3_SD_35 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA217609 • SRP030556 • All experiments • All runs

Sample: Generic sample from Lachnospiraceae bacterium ORNL_6EZ3_SD_35

SAMN00691202 • SRS255137 • All experiments • All runs

Organism: Lachnospiraceae bacterium ORNL_6EZ3_SD_35

Library:

Name: Pond-213838

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 281547.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3SQP4

material_type: DNA:DNA Somatic

product_order: PDO-61

product_part_number: P-WG-0004

project: G28946

research_project: RP-129

root_sample_id: SM-2TBRN

sample_id: SM-3SQP4

work_request: 34390

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-01-14 13:15:17.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 4 runs, 12.7M spots, 2.6G bases, 1.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR1003692	3,071,227	620.4M	391.2Mb	2013-09-27
SRR1003694	3,305,314	667.7M	425.1Mb	2013-09-27
SRR1003695	3,141,963	634.7M	402.3Mb	2013-09-27
SRR1003698	3,201,340	646.7M	410.3Mb	2013-09-27

ID:: 509914

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Sequence Read Archive

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